Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_14260 | Not Available | Negative | 3417705 - 3419381 | 63050.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_14265 | Not Available | Negative | 3419399 - 3421087 | 64097.1 |
| susc/raga family tonb-linked outer membrane protein | DWW04_14270 | Not Available | Negative | 3421101 - 3424421 | 122289.0 |
| fecr family protein | DWW04_14275 | Not Available | Negative | 3424671 - 3425684 | 39154.6 |
| rna polymerase sigma-70 factor | DWW04_14280 | Not Available | Negative | 3425756 - 3426346 | 23200.0 |
| carbohydrate esterase | DWW04_14285 | Not Available | Negative | 3426522 - 3428414 | 71351.7 |
| sgnh/gdsl hydrolase family protein | DWW04_14290 | Not Available | Negative | 3428692 - 3429543 | 32485.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW04_14295 | Not Available | Negative | 3430144 - 3431652 | 56873.3 |
| susc/raga family tonb-linked outer membrane protein | DWW04_14300 | Not Available | Negative | 3431674 - 3434895 | 118912.0 |
| duf4373 domain-containing protein | DWW04_14305 | Not Available | Negative | 3435600 - 3436403 | 30676.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

