Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1847 domain-containing protein | DWW04_14160 | Not Available | Positive | 3388949 - 3389590 | 24003.9 |
| fad-binding protein | DWW04_14165 | Not Available | Positive | 3389605 - 3391248 | 60755.8 |
| flavodoxin | DWW04_14170 | Not Available | Negative | 3391334 - 3391858 | 19475.1 |
| 2-oxoisovalerate dehydrogenase | DWW04_14175 | Not Available | Negative | 3391931 - 3393964 | 75451.6 |
| 2-oxo acid dehydrogenase subunit e2 | DWW04_14180 | Not Available | Negative | 3393993 - 3395342 | 49047.7 |
| lipoate--protein ligase family protein | DWW04_14185 | Not Available | Negative | 3395409 - 3396161 | 28807.7 |
| dihydrolipoyl dehydrogenase | DWW04_14190 | Not Available | Negative | 3396161 - 3397510 | 48289.8 |
| luxr family transcriptional regulator | DWW04_14195 | Not Available | Positive | 3397618 - 3398238 | 23409.6 |
| tonb-dependent receptor | DWW04_14200 | Not Available | Positive | 3398408 - 3400831 | 92022.9 |
| hypothetical protein | DWW04_14205 | Not Available | Negative | 3401067 - 3402029 | 36819.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

