Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DWW04_14055 | Not Available | Positive | 3365775 - 3366131 | 13441.4 |
| prephenate dehydratase | DWW04_14060 | Not Available | Positive | 3366390 - 3367232 | 31796.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW04_14065 | Not Available | Positive | 3367207 - 3368391 | 45007.1 |
| 3-deoxy-7-phosphoheptulonate synthase | DWW04_14070 | Not Available | Positive | 3368411 - 3369478 | 39926.6 |
| prephenate dehydrogenase/arogenate dehydrogenase family protein | DWW04_14075 | Not Available | Positive | 3369483 - 3370256 | 29349.4 |
| hypothetical protein | DWW04_14080 | Not Available | Negative | 3370319 - 3370513 | 6900.72 |
| duf2089 family protein | DWW04_14085 | Not Available | Negative | 3370513 - 3370794 | 10336.8 |
| alpha/beta hydrolase | DWW04_14090 | Not Available | Negative | 3370796 - 3371767 | 34973.7 |
| tonb-dependent receptor | DWW04_14095 | Not Available | Positive | 3372324 - 3374345 | 76800.8 |
| hypothetical protein | DWW04_14100 | Not Available | Positive | 3374359 - 3375501 | 41048.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

