Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| patatin family protein | DWW04_14005 | Not Available | Negative | 3351811 - 3352665 | 32942.3 |
| peptidase m24 family protein | DWW04_14010 | Not Available | Positive | 3352995 - 3354386 | 51868.5 |
| aminopeptidase | DWW04_14015 | Not Available | Positive | 3354415 - 3355626 | 45984.5 |
| single-stranded-dna-specific exonuclease recj | DWW04_14020 | Not Available | Positive | 3355741 - 3357513 | 66543.4 |
| recq family atp-dependent dna helicase | DWW04_14025 | Not Available | Positive | 3357631 - 3359526 | 73014.2 |
| o-glcnacase | DWW04_14030 | Not Available | Positive | 3359573 - 3361786 | 84823.3 |
| tetratricopeptide repeat protein | DWW04_14035 | Not Available | Positive | 3361801 - 3362751 | 35731.7 |
| ai-2e family transporter | DWW04_14040 | Not Available | Positive | 3362811 - 3363812 | 37013.0 |
| pyridoxal phosphate-dependent aminotransferase | DWW04_14045 | Not Available | Negative | 3363813 - 3364988 | 44675.0 |
| protease | DWW04_14050 | Not Available | Negative | 3365055 - 3365585 | 18952.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

