Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxc | DWW04_00905 | Not Available | Negative | 154099 - 155436 | 47190.9 |
| fe-s cluster domain-containing protein | DWW04_00910 | Not Available | Negative | 155476 - 156423 | 32368.5 |
| rsec/mucc family positive regulator of sigma(e) | DWW04_00915 | Not Available | Negative | 156444 - 156872 | 15786.6 |
| threonine ammonia-lyase | DWW04_00920 | Not Available | Negative | 157051 - 158247 | 42500.6 |
| dmt family transporter | DWW04_00925 | Not Available | Negative | 158428 - 159348 | 33753.7 |
| mfs transporter | DWW04_00930 | Not Available | Negative | 159380 - 160570 | 43443.1 |
| glutamate decarboxylase | DWW04_00935 | Not Available | Positive | 160958 - 162406 | 54683.8 |
| glutaminase | DWW04_00940 | Not Available | Positive | 162472 - 163434 | 34699.8 |
| copper homeostasis protein cutc | DWW04_00945 | Not Available | Positive | 163735 - 164598 | 31317.4 |
| transglutaminase domain-containing protein | DWW04_00950 | Not Available | Negative | 164689 - 167352 | 99116.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

