Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | DWW04_13745 | Not Available | Negative | 3287262 - 3288431 | 42721.3 |
| s-layer protein | DWW04_13750 | Not Available | Negative | 3289383 - 3291062 | 64261.8 |
| carbon starvation protein a | DWW04_13755 | Not Available | Positive | 3291141 - 3292571 | 52369.6 |
| hypothetical protein | DWW04_13760 | Not Available | Positive | 3292558 - 3292779 | 8766.94 |
| hypothetical protein | DWW04_13765 | Not Available | Positive | 3292798 - 3293289 | 17847.5 |
| beta-n-acetylhexosaminidase | DWW04_13770 | Not Available | Negative | 3293398 - 3295704 | 85955.2 |
| endonuclease/exonuclease/phosphatase family protein | DWW04_13775 | Not Available | Negative | 3295761 - 3296792 | 39607.7 |
| excinuclease abc subunit uvra | DWW04_13780 | Not Available | Negative | 3297044 - 3299845 | 104894.0 |
| hypothetical protein | DWW04_13785 | Not Available | Positive | 3299927 - 3301426 | 58043.4 |
| duf5110 domain-containing protein | DWW04_13790 | Not Available | Negative | 3301786 - 3304263 | 95768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

