Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | DWW04_13695 | Not Available | Negative | 3276748 - 3278787 | 76800.4 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DWW04_13700 | Not Available | Negative | 3278796 - 3279698 | 35021.3 |
| hypothetical protein | DWW04_13705 | Not Available | Negative | 3279750 - 3280313 | 21611.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DWW04_13710 | Not Available | Negative | 3280375 - 3281142 | 27768.6 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DWW04_13715 | Not Available | Negative | 3281159 - 3282544 | 51185.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DWW04_13720 | Not Available | Negative | 3282550 - 3283590 | 36860.4 |
| hd domain-containing protein | DWW04_13725 | Not Available | Negative | 3283723 - 3284958 | 47177.2 |
| orotidine 5'-phosphate decarboxylase | DWW04_13730 | Not Available | Negative | 3285049 - 3285867 | 30601.6 |
| peptide chain release factor 1 | DWW04_13735 | Not Available | Negative | 3285904 - 3287019 | 42004.6 |
| hypothetical protein | DWW04_13740 | Not Available | Negative | 3287003 - 3287281 | 10819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

