Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-arabinofuranosidase | DWW04_13590 | Not Available | Positive | 3242202 - 3244685 | 93174.5 |
| endo-polygalacturonase | DWW04_13600 | Not Available | Positive | 3246135 - 3247568 | 53766.6 |
| hypothetical protein | DWW04_13605 | Not Available | Positive | 3247759 - 3248667 | 35044.9 |
| hypothetical protein | DWW04_13610 | Not Available | Positive | 3248805 - 3250409 | 60865.0 |
| polygalacturonase | DWW04_13615 | Not Available | Positive | 3250520 - 3252067 | 55993.8 |
| heparinase | DWW04_13620 | Not Available | Positive | 3252107 - 3254386 | 87076.1 |
| hypothetical protein | DWW04_13625 | Not Available | Positive | 3254535 - 3256157 | 61463.2 |
| glycoside hydrolase | DWW04_13630 | Not Available | Positive | 3256235 - 3257629 | 52520.9 |
| alpha/beta hydrolase | DWW04_13635 | Not Available | Positive | 3257654 - 3258553 | 34032.0 |
| glycoside hydrolase family 127 protein | DWW04_13640 | Not Available | Positive | 3258667 - 3260589 | 73189.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

