Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | DWW04_13540 | Not Available | Negative | 3221481 - 3223847 | 87999.0 |
| hypothetical protein | DWW04_13545 | Not Available | Positive | 3223981 - 3225582 | 60362.1 |
| six-hairpin glycosidase | DWW04_13550 | Not Available | Positive | 3225673 - 3228411 | 102877.0 |
| helix-turn-helix domain-containing protein | DWW04_13555 | Not Available | Positive | 3228570 - 3231383 | 105881.0 |
| sigma-70 family rna polymerase sigma factor | DWW04_13560 | Not Available | Positive | 3231584 - 3232099 | 20663.7 |
| tonb-dependent receptor | DWW04_13565 | Not Available | Positive | 3232143 - 3235490 | 122812.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_13570 | Not Available | Positive | 3235516 - 3237456 | 71829.0 |
| hypothetical protein | DWW04_13575 | Not Available | Positive | 3237718 - 3238533 | 30690.6 |
| hypothetical protein | DWW04_13580 | Not Available | Positive | 3238609 - 3239670 | 40745.1 |
| alpha-galactosidase | DWW04_13585 | Not Available | Positive | 3239755 - 3241965 | 83916.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

