Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronyl hydrolase | DWW04_13490 | Not Available | Positive | 3204947 - 3206173 | 46570.6 |
| sigma-70 family rna polymerase sigma factor | DWW04_13495 | Not Available | Positive | 3206198 - 3206743 | 21089.3 |
| glycoside hydrolase family 97 | DWW04_13500 | Not Available | Positive | 3206756 - 3208639 | 72186.8 |
| glycoside hydrolase family 92 | DWW04_13505 | Not Available | Positive | 3208652 - 3210241 | 60022.6 |
| tonb-dependent receptor | DWW04_13510 | Not Available | Positive | 3210349 - 3213426 | 113709.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_13515 | Not Available | Positive | 3213437 - 3215263 | 68571.6 |
| endo-polygalacturonase | DWW04_13520 | Not Available | Positive | 3215432 - 3216934 | 55899.1 |
| alpha-glucosidase | DWW04_13525 | Not Available | Positive | 3216939 - 3218873 | 73483.7 |
| glycoside hydrolase family 92 protein | DWW04_13530 | Not Available | Positive | 3218870 - 3221266 | 91138.3 |
| hypothetical protein | DWW04_13535 | Not Available | Positive | 3221275 - 3221460 | 7017.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

