Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | DWW04_12615 | Not Available | Positive | 3050205 - 3051746 | 58428.5 |
| rna polymerase sigma-70 factor | DWW04_12620 | Not Available | Positive | 3052195 - 3052785 | 23445.2 |
| duf4974 domain-containing protein | DWW04_12625 | Not Available | Positive | 3052845 - 3053843 | 38139.5 |
| susc/raga family tonb-linked outer membrane protein | DWW04_12630 | Not Available | Positive | 3053999 - 3057295 | 122011.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_12635 | Not Available | Positive | 3057325 - 3058767 | 53689.5 |
| s9 family peptidase | DWW04_12640 | Not Available | Positive | 3058801 - 3059838 | 39534.7 |
| duf4145 domain-containing protein | DWW04_12650 | Not Available | Negative | 3060349 - 3060987 | 24767.8 |
| hypothetical protein | DWW04_12655 | Not Available | Positive | 3061339 - 3061530 | 7468.65 |
| hypothetical protein | DWW04_12660 | Not Available | Positive | 3061454 - 3062473 | 39899.9 |
| hypothetical protein | DWW04_12665 | Not Available | Negative | 3062589 - 3063080 | 17956.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

