Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 97 protein | DWW04_12565 | Not Available | Positive | 3027615 - 3029603 | 75396.1 |
| hybrid sensor histidine kinase/response regulator | DWW04_12570 | Not Available | Positive | 3029685 - 3033716 | 154608.0 |
| alpha-galactosidase | DWW04_12575 | Not Available | Positive | 3033924 - 3035951 | 76358.5 |
| tonb-dependent receptor | DWW04_12580 | Not Available | Positive | 3035991 - 3039044 | 113308.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_12585 | Not Available | Positive | 3039090 - 3040709 | 62013.7 |
| galactose mutarotase | DWW04_12590 | Not Available | Positive | 3040799 - 3041821 | 38766.6 |
| beta-mannosidase | DWW04_12595 | Not Available | Positive | 3041851 - 3044793 | 111224.0 |
| 9-o-acetylesterase | DWW04_12600 | Not Available | Positive | 3044886 - 3046856 | 73526.8 |
| arac family transcriptional regulator | DWW04_12605 | Not Available | Negative | 3046869 - 3047765 | 34684.5 |
| alpha-galactosidase | DWW04_12610 | Not Available | Positive | 3047953 - 3050109 | 82573.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

