Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | DWW04_12265 | Not Available | Positive | 2967001 - 2970813 | 142507.0 |
| dna-directed rna polymerase subunit beta' | DWW04_12270 | Not Available | Positive | 2970852 - 2975138 | 158832.0 |
| duf3467 domain-containing protein | DWW04_12275 | Not Available | Positive | 2975348 - 2975689 | 12561.0 |
| 30s ribosomal protein s12 | DWW04_12280 | Not Available | Positive | 2975879 - 2976292 | 14994.4 |
| 30s ribosomal protein s7 | DWW04_12285 | Not Available | Positive | 2976443 - 2976919 | 18220.1 |
| elongation factor g | DWW04_12290 | Not Available | Positive | 2976951 - 2979068 | 77490.6 |
| 30s ribosomal protein s10 | DWW04_12295 | Not Available | Positive | 2979151 - 2979456 | 11419.0 |
| 50s ribosomal protein l3 | DWW04_12300 | Not Available | Positive | 2979478 - 2980095 | 21900.8 |
| 50s ribosomal protein l4 | DWW04_12305 | Not Available | Positive | 2980095 - 2980721 | 23075.8 |
| 50s ribosomal protein l23 | DWW04_12310 | Not Available | Positive | 2980743 - 2981033 | 10832.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

