Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DWW04_12165 | Not Available | Positive | 2955796 - 2956497 | 26452.2 |
| gnat family n-acetyltransferase | DWW04_12170 | Not Available | Negative | 2956548 - 2957504 | 36966.3 |
| porin family protein | DWW04_12175 | Not Available | Negative | 2957619 - 2958110 | 18089.7 |
| gamma carbonic anhydrase family protein | DWW04_12180 | Not Available | Negative | 2958156 - 2958680 | 18490.4 |
| aminopeptidase p family protein | DWW04_12185 | Not Available | Negative | 2958690 - 2960471 | 66735.9 |
| 30s ribosomal protein s21 | DWW04_12190 | Not Available | Positive | 2960640 - 2960831 | 7526.36 |
| recombinase | DWW04_12195 | Not Available | Positive | 2960909 - 2961790 | 33862.4 |
| ribosome-associated translation inhibitor raia | DWW04_12200 | Not Available | Positive | 2961806 - 2962105 | 11371.8 |
| Trna-thr | Not Available | Not Available | Positive | 2962204 - 2962280 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2962323 - 2962405 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

