Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_12115 | Not Available | Negative | 2937994 - 2941017 | 111942.0 |
| duf1624 domain-containing protein | DWW04_12120 | Not Available | Negative | 2941093 - 2942211 | 41589.8 |
| alpha-n-acetylglucosaminidase | DWW04_12125 | Not Available | Negative | 2942219 - 2944483 | 87256.1 |
| hybrid sensor histidine kinase/response regulator | DWW04_12130 | Not Available | Negative | 2944566 - 2948786 | 162695.0 |
| Trna-asn | Not Available | Not Available | Positive | 2948924 - 2948997 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2949022 - 2949095 | Not Available |
| adenosine kinase | DWW04_12145 | Not Available | Positive | 2949176 - 2950162 | 35367.0 |
| pdz domain-containing protein | DWW04_12150 | Not Available | Positive | 2950206 - 2951900 | 63116.7 |
| hypothetical protein | DWW04_12155 | Not Available | Negative | 2951966 - 2954263 | 87603.9 |
| sensor histidine kinase | DWW04_12160 | Not Available | Positive | 2954385 - 2955770 | 53539.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

