Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_12065 | Not Available | Negative | 2916889 - 2918547 | 63084.0 |
| tonb-dependent receptor | DWW04_12070 | Not Available | Negative | 2918565 - 2921603 | 112352.0 |
| hypothetical protein | DWW04_12075 | Not Available | Negative | 2921626 - 2923125 | 56182.6 |
| hybrid sensor histidine kinase/response regulator | DWW04_12080 | Not Available | Positive | 2923339 - 2927379 | 153067.0 |
| histidine-type phosphatase | DWW04_12085 | Not Available | Negative | 2927628 - 2929367 | 66782.8 |
| glycoside hydrolase family 92 protein | DWW04_12090 | Not Available | Negative | 2929374 - 2931653 | 86140.9 |
| glycoside hydrolase family 28 protein | DWW04_12095 | Not Available | Negative | 2931656 - 2933068 | 52012.0 |
| glycoside hydrolase family 92 protein | DWW04_12100 | Not Available | Negative | 2933094 - 2935427 | 88715.2 |
| glycerophosphodiester phosphodiesterase | DWW04_12105 | Not Available | Negative | 2935447 - 2936259 | 30911.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_12110 | Not Available | Negative | 2936333 - 2937973 | 61754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

