Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4374 domain-containing protein | DWW04_12015 | Not Available | Positive | 2904775 - 2906175 | 51059.7 |
| pepsy domain-containing protein | DWW04_12020 | Not Available | Positive | 2906192 - 2907388 | 45498.7 |
| magnesium transporter cora family protein | DWW04_12025 | Not Available | Negative | 2907491 - 2908414 | 35626.5 |
| hypothetical protein | DWW04_12030 | Not Available | Positive | 2908465 - 2908710 | 9412.92 |
| phosphopyruvate hydratase | DWW04_12035 | Not Available | Negative | 2908703 - 2909983 | 46019.8 |
| peroxiredoxin | DWW04_12040 | Not Available | Positive | 2910224 - 2910790 | 21053.1 |
| alkyl hydroperoxide reductase subunit f | DWW04_12045 | Not Available | Positive | 2910803 - 2912353 | 55984.5 |
| laci family transcriptional regulator | DWW04_12050 | Not Available | Positive | 2912493 - 2913515 | 38241.5 |
| xylanase | DWW04_12055 | Not Available | Negative | 2913596 - 2915161 | 59523.2 |
| beta-glycosidase | DWW04_12060 | Not Available | Negative | 2915174 - 2916772 | 59665.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

