Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DWW04_11960 | Not Available | Positive | 2885975 - 2886814 | 31629.0 |
| hypothetical protein | DWW04_11965 | Not Available | Negative | 2886882 - 2887628 | 28414.8 |
| aminoglycoside 6-adenylyltransferase aads | DWW04_11970 | Not Available | Positive | 2887857 - 2888720 | 34109.8 |
| class d beta-lactamase | DWW04_11975 | Not Available | Positive | 2888898 - 2889755 | 32965.2 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(f) | DWW04_11980 | Not Available | Negative | 2889963 - 2890602 | 24434.0 |
| tonb-dependent receptor | DWW04_11990 | Not Available | Positive | 2891584 - 2894910 | 123092.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_11995 | Not Available | Positive | 2894933 - 2896630 | 64042.9 |
| hypothetical protein | DWW04_12000 | Not Available | Positive | 2896728 - 2899310 | 98550.4 |
| beta-galactosidase | DWW04_12005 | Not Available | Positive | 2899326 - 2902166 | 108458.0 |
| tonb-dependent receptor | DWW04_12010 | Not Available | Positive | 2902333 - 2904720 | 89645.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

