Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent recd-like dna helicase | DWW04_11860 | Not Available | Negative | 2865667 - 2867937 | 85050.9 |
| hypothetical protein | DWW04_11865 | Not Available | Negative | 2867972 - 2869165 | 46054.8 |
| type i restriction endonuclease subunit r | DWW04_11870 | Not Available | Negative | 2869178 - 2872312 | 119594.0 |
| type i restriction endonuclease subunit s | DWW04_11875 | Not Available | Negative | 2872359 - 2872868 | 19220.9 |
| winged helix-turn-helix transcriptional regulator | DWW04_11880 | Not Available | Negative | 2872879 - 2873967 | 41744.4 |
| restriction endonuclease subunit s | DWW04_11885 | Not Available | Negative | 2873981 - 2874733 | 28388.3 |
| integrase | DWW04_11890 | Not Available | Negative | 2874733 - 2875725 | 38217.6 |
| sam-dependent dna methyltransferase | DWW04_11895 | Not Available | Negative | 2875779 - 2877338 | 58732.4 |
| xre family transcriptional regulator | DWW04_11900 | Not Available | Negative | 2877343 - 2877543 | 7497.09 |
| hypothetical protein | DWW04_11905 | Not Available | Negative | 2878832 - 2879080 | 9517.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

