Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_00755 | Not Available | Negative | 120767 - 121273 | 19744.7 |
| glycosyltransferase | DWW04_00760 | Not Available | Positive | 121478 - 122635 | 44874.5 |
| antibiotic biosynthesis monooxygenase | DWW04_00765 | Not Available | Positive | 122684 - 122959 | 10402.5 |
| duf340 domain-containing protein | DWW04_00770 | Not Available | Positive | 123514 - 123801 | 10416.4 |
| lysine exporter lyso family protein | DWW04_00775 | Not Available | Positive | 123791 - 124411 | 22109.5 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 125799 - 126168 | Not Available |
| abc transporter permease | DWW04_00780 | Not Available | Negative | 124759 - 126003 | 46920.5 |
| pyridoxal phosphate-dependent aminotransferase | DWW04_00785 | Not Available | Negative | 126005 - 127207 | 44955.1 |
| fucose isomerase | DWW04_00790 | Not Available | Positive | 127373 - 128608 | 46220.3 |
| duf4494 domain-containing protein | DWW04_00795 | Not Available | Positive | 128704 - 129186 | 18209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

