Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | DWW04_11710 | Not Available | Positive | 2844198 - 2846534 | 88302.4 |
| conjugal transfer protein trax | DWW04_11715 | Not Available | Positive | 2846535 - 2847260 | 26640.4 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DWW04_11720 | Not Available | Negative | 2847270 - 2847782 | 19089.2 |
| duf4112 domain-containing protein | DWW04_11725 | Not Available | Negative | 2847793 - 2848260 | 17115.8 |
| hypothetical protein | DWW04_11730 | Not Available | Negative | 2848260 - 2848682 | 16181.4 |
| arsenate reductase arsc | DWW04_11735 | Not Available | Negative | 2848698 - 2849123 | 16088.2 |
| sam-dependent methyltransferase | DWW04_11740 | Not Available | Negative | 2849120 - 2849824 | 25525.1 |
| n-acetylmuramoyl-l-alanine amidase | DWW04_11745 | Not Available | Negative | 2849931 - 2850551 | 23904.9 |
| duf4099 domain-containing protein | DWW04_11750 | Not Available | Positive | 2850642 - 2851418 | 29592.7 |
| dna mismatch repair protein muts | DWW04_11755 | Not Available | Positive | 2851431 - 2852741 | 49766.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

