Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag family conjugative transposon atpase | DWW04_11660 | Not Available | Positive | 2834172 - 2837012 | 109913.0 |
| hypothetical protein | DWW04_11665 | Not Available | Positive | 2837000 - 2837737 | 27495.7 |
| hypothetical protein | DWW04_11670 | Not Available | Positive | 2837752 - 2838450 | 26029.8 |
| duf5045 domain-containing protein | DWW04_11675 | Not Available | Positive | 2838440 - 2839126 | 26941.4 |
| hypothetical protein | DWW04_11680 | Not Available | Positive | 2839158 - 2840306 | 41366.2 |
| conjugative transposon protein trak | DWW04_11685 | Not Available | Positive | 2840325 - 2840921 | 22792.6 |
| hypothetical protein | DWW04_11690 | Not Available | Positive | 2840943 - 2841434 | 18714.6 |
| conjugative transposon protein tram | DWW04_11695 | Not Available | Positive | 2841434 - 2842669 | 45926.6 |
| conjugative transposon protein tran | DWW04_11700 | Not Available | Positive | 2842805 - 2843677 | 33397.3 |
| hypothetical protein | DWW04_11705 | Not Available | Positive | 2843690 - 2844163 | 18045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

