Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DWW04_11555 | Not Available | Negative | 2809408 - 2809911 | 19667.6 |
| trimeric intracellular cation channel family protein | DWW04_11560 | Not Available | Negative | 2810070 - 2810684 | 22186.8 |
| udp-n-acetyl glucosamine 2-epimerase | DWW04_11565 | Not Available | Positive | 2810768 - 2811856 | 40299.0 |
| duf3078 domain-containing protein | DWW04_11570 | Not Available | Negative | 2811963 - 2813357 | 53481.6 |
| ctp synthase | DWW04_11575 | Not Available | Positive | 2813567 - 2815165 | 60096.4 |
| membrane protein insertase yidc | DWW04_11580 | Not Available | Positive | 2815205 - 2817073 | 71009.9 |
| s9 family peptidase | DWW04_11590 | Not Available | Positive | 2817301 - 2819421 | 79973.1 |
| rlua family pseudouridine synthase | DWW04_11595 | Not Available | Negative | 2819870 - 2820796 | 35671.1 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DWW04_11600 | Not Available | Negative | 2820841 - 2822262 | 53931.0 |
| pyruvate, phosphate dikinase | DWW04_11605 | Not Available | Positive | 2822460 - 2825180 | 99897.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

