Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase | DWW04_11505 | Not Available | Positive | 2799025 - 2799966 | 36265.7 |
| aspartate carbamoyltransferase regulatory subunit | DWW04_11510 | Not Available | Positive | 2799976 - 2800443 | 17419.4 |
| flavin reductase family protein | DWW04_11515 | Not Available | Positive | 2800449 - 2801036 | 22010.7 |
| port family protein | DWW04_11520 | Not Available | Positive | 2801046 - 2801765 | 27583.6 |
| serine hydroxymethyltransferase | DWW04_11525 | Not Available | Positive | 2802021 - 2803301 | 46843.6 |
| mate family efflux transporter | DWW04_11530 | Not Available | Positive | 2803502 - 2804845 | 49329.3 |
| ompa family protein | DWW04_11535 | Not Available | Positive | 2804894 - 2805613 | 24484.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DWW04_11540 | Not Available | Positive | 2805741 - 2806463 | 27943.4 |
| duf1460 domain-containing protein | DWW04_11545 | Not Available | Negative | 2806435 - 2807319 | 33184.2 |
| biotin/lipoyl-binding protein | DWW04_11550 | Not Available | Negative | 2807444 - 2809219 | 66750.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

