Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 113053 - 113126 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 113156 - 113232 | Not Available |
| formyltetrahydrofolate deformylase | DWW04_00715 | Not Available | Positive | 113497 - 114354 | 33302.5 |
| imidazole glycerol phosphate synthase subunit hish | DWW04_00720 | Not Available | Positive | 114354 - 114944 | 22284.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DWW04_00725 | Not Available | Positive | 114986 - 115705 | 26581.2 |
| imidazole glycerol phosphate synthase subunit hisf | DWW04_00730 | Not Available | Positive | 115715 - 116470 | 27227.5 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | DWW04_00735 | Not Available | Positive | 116636 - 117247 | 23196.7 |
| atp-binding cassette domain-containing protein | DWW04_00740 | Not Available | Positive | 117252 - 118007 | 28375.1 |
| aspartate kinase | DWW04_00745 | Not Available | Positive | 118115 - 119434 | 49296.1 |
| diaminopimelate decarboxylase | DWW04_00750 | Not Available | Positive | 119542 - 120702 | 42735.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

