Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DWW04_11305 | Not Available | Negative | 2752603 - 2755161 | 96171.0 |
| atp-dependent clp protease atp-binding subunit | DWW04_11310 | Not Available | Positive | 2755526 - 2758042 | 93997.0 |
| molecular chaperone htpg | DWW04_11315 | Not Available | Positive | 2758177 - 2760222 | 78260.4 |
| patatin | DWW04_11320 | Not Available | Positive | 2760352 - 2762661 | 87780.8 |
| Trna-arg | Not Available | Not Available | Positive | 2762751 - 2762827 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2762846 - 2762922 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | DWW04_11335 | Not Available | Negative | 2763513 - 2764406 | 32818.2 |
| nad-dependent dna ligase liga | DWW04_11340 | Not Available | Negative | 2764508 - 2766505 | 75132.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DWW04_11345 | Not Available | Positive | 2766605 - 2767279 | 25453.7 |
| dihydroorotate dehydrogenase | DWW04_11350 | Not Available | Negative | 2767644 - 2768555 | 32296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

