Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DWW04_11050 | Not Available | Positive | 2700171 - 2701343 | 45623.9 |
| glycosyltransferase family 2 protein | DWW04_11055 | Not Available | Positive | 2701298 - 2702236 | 36325.2 |
| glycosyltransferase family 2 protein | DWW04_11060 | Not Available | Positive | 2702233 - 2703267 | 40173.6 |
| glycosyltransferase family 4 protein | DWW04_11065 | Not Available | Positive | 2703264 - 2704415 | 44103.8 |
| dna methylase | DWW04_11075 | Not Available | Positive | 2705393 - 2707000 | 60778.4 |
| duf1016 domain-containing protein | DWW04_11080 | Not Available | Negative | 2707064 - 2708077 | 39563.5 |
| dna-binding protein | DWW04_11085 | Not Available | Negative | 2708213 - 2708539 | 13049.7 |
| dna-binding protein | DWW04_11090 | Not Available | Negative | 2708543 - 2708854 | 12140.7 |
| rtec protein | DWW04_11095 | Not Available | Negative | 2709253 - 2710113 | 33739.4 |
| arac family transcriptional regulator | DWW04_11100 | Not Available | Negative | 2710219 - 2711076 | 33025.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

