Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DWW04_10850 | Not Available | Negative | 2656943 - 2657587 | 24578.7 |
| hypothetical protein | DWW04_10855 | Not Available | Negative | 2657729 - 2658154 | 15903.2 |
| lrp/asnc family transcriptional regulator | DWW04_10860 | Not Available | Positive | 2658346 - 2658816 | 17952.8 |
| magnesium and cobalt transport protein cora | DWW04_10865 | Not Available | Negative | 2658841 - 2659881 | 40225.7 |
| site-specific integrase | DWW04_10870 | Not Available | Positive | 2660365 - 2661561 | 46448.9 |
| upxy family transcription antiterminator | DWW04_10875 | Not Available | Positive | 2662046 - 2662591 | 20948.9 |
| polysaccharide biosynthesis protein | DWW04_10880 | Not Available | Positive | 2662598 - 2664556 | 75022.1 |
| hypothetical protein | DWW04_10885 | Not Available | Positive | 2664558 - 2665742 | 44273.0 |
| ompa family protein | DWW04_10890 | Not Available | Positive | 2665771 - 2666997 | 46676.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DWW04_10895 | Not Available | Positive | 2667018 - 2668163 | 42174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

