Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_10645 | Not Available | Negative | 2603124 - 2603525 | 15397.0 |
| rna polymerase sigma factor rpod/siga | DWW04_10650 | Not Available | Negative | 2603747 - 2604607 | 32805.3 |
| do family serine endopeptidase | DWW04_10655 | Not Available | Negative | 2605113 - 2606636 | 53867.6 |
| duf417 domain-containing protein | DWW04_10660 | Not Available | Negative | 2606957 - 2607547 | 21415.5 |
| helix-turn-helix domain-containing protein | DWW04_10665 | Not Available | Negative | 2607640 - 2608476 | 32672.3 |
| hybrid sensor histidine kinase/response regulator | DWW04_10670 | Not Available | Positive | 2608792 - 2611929 | 119957.0 |
| hypothetical protein | DWW04_10675 | Not Available | Negative | 2612392 - 2613732 | 49704.5 |
| glycoside hydrolase family 28 protein | DWW04_10680 | Not Available | Negative | 2613741 - 2615072 | 49415.6 |
| hydrolase | DWW04_10685 | Not Available | Negative | 2615139 - 2617895 | 104296.0 |
| six-hairpin glycosidase | DWW04_10690 | Not Available | Negative | 2617947 - 2621258 | 126734.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

