Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_10595 | Not Available | Negative | 2588992 - 2592333 | 123095.0 |
| energy-dependent translational throttle protein etta | DWW04_10600 | Not Available | Negative | 2592671 - 2594359 | 63738.2 |
| mfs transporter | DWW04_10605 | Not Available | Negative | 2594442 - 2595608 | 43912.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DWW04_10610 | Not Available | Negative | 2595625 - 2596446 | 29522.8 |
| had family phosphatase | DWW04_10615 | Not Available | Negative | 2596499 - 2597149 | 24626.4 |
| mate family efflux transporter | DWW04_10620 | Not Available | Positive | 2597239 - 2598591 | 49434.7 |
| potassium/proton antiporter | DWW04_10625 | Not Available | Positive | 2598588 - 2600036 | 52852.7 |
| divalent metal cation transporter | DWW04_10630 | Not Available | Negative | 2600113 - 2601366 | 45673.9 |
| hypothetical protein | DWW04_10635 | Not Available | Positive | 2601469 - 2601867 | 15082.7 |
| clostripain | DWW04_10640 | Not Available | Negative | 2601851 - 2603113 | 47084.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

