Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWW04_10545 | Not Available | Negative | 2578576 - 2581173 | 96002.4 |
| hypothetical protein | DWW04_10550 | Not Available | Negative | 2581531 - 2581752 | 8777.59 |
| hypothetical protein | DWW04_10555 | Not Available | Negative | 2582068 - 2582256 | 6895.25 |
| hypothetical protein | DWW04_10560 | Not Available | Positive | 2582248 - 2582889 | 24000.7 |
| duf3987 domain-containing protein | DWW04_10565 | Not Available | Positive | 2582997 - 2584826 | 68632.1 |
| duf4248 domain-containing protein | DWW04_10570 | Not Available | Negative | 2585004 - 2585279 | 10417.8 |
| dna-binding protein | DWW04_10575 | Not Available | Positive | 2585548 - 2586039 | 17658.2 |
| n-acetylmuramoyl-l-alanine amidase | DWW04_10580 | Not Available | Positive | 2586286 - 2586702 | 15904.5 |
| hypothetical protein | DWW04_10585 | Not Available | Positive | 2586873 - 2587187 | 12951.2 |
| aaa family atpase | DWW04_10590 | Not Available | Negative | 2587282 - 2588832 | 60522.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

