Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | DWW04_10345 | Not Available | Positive | 2531876 - 2532718 | 30709.2 |
| ll-diaminopimelate aminotransferase | DWW04_10350 | Not Available | Positive | 2532765 - 2533994 | 45754.8 |
| hypothetical protein | DWW04_10355 | Not Available | Positive | 2534094 - 2534819 | 25982.1 |
| transcriptional regulator | DWW04_10360 | Not Available | Positive | 2534911 - 2535267 | 13522.4 |
| ammonium transporter | DWW04_10365 | Not Available | Positive | 2535337 - 2536734 | 50086.4 |
| glutamine synthetase type iii | DWW04_10370 | Not Available | Positive | 2536812 - 2539001 | 82284.0 |
| atp-dependent dethiobiotin synthetase biod | DWW04_10375 | Not Available | Negative | 2539118 - 2539762 | 24299.9 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DWW04_10380 | Not Available | Negative | 2539777 - 2540532 | 28879.0 |
| duf452 family protein | DWW04_10385 | Not Available | Negative | 2540544 - 2541197 | 25049.2 |
| 8-amino-7-oxononanoate synthase | DWW04_10390 | Not Available | Negative | 2541194 - 2542345 | 43084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

