Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DWW04_10245 | Not Available | Negative | 2508260 - 2509480 | 44096.1 |
| abc transporter atp-binding protein | DWW04_10250 | Not Available | Negative | 2509499 - 2510242 | 27181.7 |
| efflux rnd transporter periplasmic adaptor subunit | DWW04_10255 | Not Available | Negative | 2510284 - 2511507 | 43933.7 |
| tolc family protein | DWW04_10260 | Not Available | Negative | 2511532 - 2512875 | 50224.2 |
| duf4492 domain-containing protein | DWW04_10265 | Not Available | Positive | 2513029 - 2513247 | 8655.77 |
| cytochrome ubiquinol oxidase subunit i | DWW04_10270 | Not Available | Positive | 2513271 - 2514773 | 55230.0 |
| cytochrome d ubiquinol oxidase subunit ii | DWW04_10275 | Not Available | Positive | 2514837 - 2515982 | 42811.6 |
| 6-phosphogluconolactonase | DWW04_10280 | Not Available | Negative | 2516278 - 2516982 | 26350.3 |
| glucose-6-phosphate dehydrogenase | DWW04_10285 | Not Available | Negative | 2517043 - 2518551 | 58036.4 |
| phosphogluconate dehydrogenase (nadp(+)-dependent, decarboxylating) | DWW04_10290 | Not Available | Negative | 2518600 - 2520036 | 52961.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

