Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | DWW04_10145 | Not Available | Negative | 2485144 - 2486070 | 35263.2 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DWW04_10150 | Not Available | Negative | 2486073 - 2487338 | 44863.9 |
| acyl carrier protein | DWW04_10155 | Not Available | Negative | 2487357 - 2487593 | 8382.75 |
| phosphoribosylglycinamide formyltransferase | DWW04_10160 | Not Available | Positive | 2487746 - 2488324 | 21375.1 |
| rna polymerase sigma-70 factor | DWW04_10165 | Not Available | Negative | 2488296 - 2488841 | 21357.8 |
| susc/raga family tonb-linked outer membrane protein | DWW04_10170 | Not Available | Positive | 2489162 - 2492203 | 112198.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DWW04_10175 | Not Available | Positive | 2492203 - 2493906 | 63033.4 |
| rna polymerase sigma-70 factor | DWW04_10180 | Not Available | Positive | 2494152 - 2494661 | 19967.9 |
| fecr family protein | DWW04_10185 | Not Available | Positive | 2494731 - 2495534 | 30911.8 |
| tonb-dependent receptor | DWW04_10190 | Not Available | Positive | 2495531 - 2498185 | 100776.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

