Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_10095 | Not Available | Negative | 2465156 - 2466661 | 57424.9 |
| 6-phosphofructokinase | DWW04_10100 | Not Available | Positive | 2466809 - 2467819 | 35805.2 |
| hybrid sensor histidine kinase/response regulator | DWW04_10105 | Not Available | Negative | 2467829 - 2471902 | 154817.0 |
| tonb-dependent receptor | DWW04_10110 | Not Available | Positive | 2472086 - 2475253 | 118068.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_10115 | Not Available | Positive | 2475266 - 2477314 | 77383.9 |
| hypothetical protein | DWW04_10120 | Not Available | Positive | 2477572 - 2478375 | 30600.1 |
| duf229 domain-containing protein | DWW04_10125 | Not Available | Positive | 2478520 - 2479956 | 54980.7 |
| glycoside hydrolase family 29 | DWW04_10130 | Not Available | Positive | 2479960 - 2481345 | 52526.5 |
| glycoside hydrolase family 36 | DWW04_10135 | Not Available | Positive | 2481352 - 2483427 | 78562.9 |
| sulfatase | DWW04_10140 | Not Available | Positive | 2483446 - 2484999 | 57830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

