Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | DWW04_09990 | Not Available | Positive | 2439674 - 2439931 | 9588.48 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWW04_09995 | Not Available | Positive | 2439928 - 2441118 | 42254.5 |
| 3-oxoacyl-acp synthase | DWW04_10000 | Not Available | Positive | 2441122 - 2442075 | 35399.4 |
| kila-n domain-containing protein | DWW04_10005 | Not Available | Positive | 2442190 - 2443044 | 33301.9 |
| polysaccharide deacetylase family protein | DWW04_10010 | Not Available | Positive | 2443095 - 2443787 | 26652.1 |
| outer membrane lipoprotein carrier protein lola | DWW04_10015 | Not Available | Positive | 2444530 - 2445165 | 24836.5 |
| hypothetical protein | DWW04_10020 | Not Available | Positive | 2445140 - 2445682 | 20706.7 |
| hydroxymyristoyl-acp dehydratase | DWW04_10025 | Not Available | Positive | 2445684 - 2446076 | 14873.2 |
| hypothetical protein | DWW04_10035 | Not Available | Positive | 2447008 - 2447292 | 9942.82 |
| duf4221 domain-containing protein | DWW04_10040 | Not Available | Positive | 2447365 - 2448549 | 46255.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

