Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine--trna ligase | DWW04_09940 | Not Available | Positive | 2429632 - 2431113 | 56292.9 |
| aromatic amino acid lyase | DWW04_09945 | Not Available | Positive | 2431303 - 2432874 | 58959.4 |
| 3-oxoacyl-acp reductase fabg | DWW04_09950 | Not Available | Positive | 2432871 - 2433599 | 26373.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DWW04_09955 | Not Available | Positive | 2433607 - 2434836 | 44135.6 |
| acyl carrier protein | DWW04_09960 | Not Available | Positive | 2434858 - 2435109 | 9579.46 |
| acyltransferase | DWW04_09965 | Not Available | Positive | 2435109 - 2435993 | 34407.8 |
| class i sam-dependent methyltransferase | DWW04_09970 | Not Available | Positive | 2436009 - 2437079 | 40552.6 |
| hydroxymyristoyl-acp dehydratase | DWW04_09975 | Not Available | Positive | 2437076 - 2437513 | 16573.3 |
| acyl-coa thioesterase | DWW04_09980 | Not Available | Positive | 2437510 - 2437953 | 17290.6 |
| beta-acp synthase | DWW04_09985 | Not Available | Positive | 2437938 - 2439668 | 63701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

