Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DWW04_09890 | Not Available | Positive | 2407603 - 2409165 | 57637.3 |
| hypothetical protein | DWW04_09895 | Not Available | Positive | 2409747 - 2409944 | 7496.5 |
| alpha-l-arabinofuranosidase | DWW04_09900 | Not Available | Negative | 2409968 - 2411947 | 75411.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW04_09905 | Not Available | Negative | 2411971 - 2413506 | 57657.1 |
| response regulator | DWW04_09910 | Not Available | Positive | 2413776 - 2418002 | 161538.0 |
| glycoside hydrolase family 97 protein | DWW04_09915 | Not Available | Positive | 2418135 - 2420063 | 73037.7 |
| tonb-dependent receptor | DWW04_09920 | Not Available | Positive | 2420495 - 2423704 | 119134.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_09925 | Not Available | Positive | 2423724 - 2425475 | 66214.8 |
| hypothetical protein | DWW04_09930 | Not Available | Positive | 2425500 - 2427278 | 64756.5 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW04_09935 | Not Available | Positive | 2427358 - 2429241 | 70425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

