Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DWW04_09840 | Not Available | Positive | 2392232 - 2393296 | 38894.4 |
| protein translocase subunit secdf | DWW04_09845 | Not Available | Negative | 2393543 - 2396530 | 109218.0 |
| m3 family peptidase | DWW04_09850 | Not Available | Negative | 2396709 - 2398796 | 78979.4 |
| endonuclease | DWW04_09855 | Not Available | Negative | 2398823 - 2399902 | 40431.1 |
| rhomboid family intramembrane serine protease | DWW04_09860 | Not Available | Negative | 2399906 - 2400799 | 33946.6 |
| rhomboid family intramembrane serine protease | DWW04_09865 | Not Available | Negative | 2400780 - 2401457 | 25391.6 |
| hu family dna-binding protein | DWW04_09870 | Not Available | Positive | 2401668 - 2401940 | 9278.29 |
| duf4981 domain-containing protein | DWW04_09875 | Not Available | Positive | 2402033 - 2405362 | 126111.0 |
| dna-binding protein | DWW04_09880 | Not Available | Positive | 2405534 - 2406397 | 33051.7 |
| trna 2-thiouridine(34) synthase mnma | DWW04_09885 | Not Available | Positive | 2406400 - 2407455 | 40026.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

