Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin activation protein | DWW04_09690 | Not Available | Positive | 2355668 - 2356684 | 40484.6 |
| glycosyltransferase | DWW04_09695 | Not Available | Positive | 2356657 - 2357772 | 42805.2 |
| glycosyltransferase | DWW04_09700 | Not Available | Positive | 2357785 - 2359047 | 47725.6 |
| glycosyltransferase | DWW04_09705 | Not Available | Positive | 2359040 - 2359786 | 28694.4 |
| hypothetical protein | DWW04_09710 | Not Available | Negative | 2359813 - 2362305 | 93094.6 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DWW04_09715 | Not Available | Positive | 2362390 - 2363085 | 25492.4 |
| s-ribosylhomocysteine lyase | DWW04_09720 | Not Available | Positive | 2363097 - 2363582 | 18564.4 |
| 30s ribosomal protein s15 | DWW04_09725 | Not Available | Negative | 2363684 - 2363953 | 10364.5 |
| duf5106 domain-containing protein | DWW04_09730 | Not Available | Negative | 2364032 - 2364967 | 36031.5 |
| hypothetical protein | DWW04_09735 | Not Available | Negative | 2365040 - 2365327 | 11347.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

