Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DWW04_09485 | Not Available | Positive | 2314886 - 2315953 | 40291.2 |
| hypothetical protein | DWW04_09490 | Not Available | Positive | 2316066 - 2317463 | 52235.9 |
| isoprenyl transferase | DWW04_09495 | Not Available | Positive | 2317497 - 2318228 | 28104.5 |
| outer membrane protein assembly factor bama | DWW04_09500 | Not Available | Positive | 2318240 - 2320879 | 100661.0 |
| omph family outer membrane protein | DWW04_09505 | Not Available | Positive | 2320900 - 2321415 | 18967.6 |
| omph family outer membrane protein | DWW04_09510 | Not Available | Positive | 2321473 - 2321976 | 19288.3 |
| glutamate racemase | DWW04_09515 | Not Available | Positive | 2322079 - 2322924 | 31328.9 |
| pyridoxamine kinase | DWW04_09520 | Not Available | Positive | 2322981 - 2323853 | 32875.6 |
| hypothetical protein | DWW04_09525 | Not Available | Positive | 2323850 - 2324101 | 10025.2 |
| abc transporter permease | DWW04_09530 | Not Available | Negative | 2324239 - 2325477 | 45814.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

