Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_09430 | Not Available | Negative | 2308424 - 2308720 | 11381.7 |
| Trna-leu | Not Available | Not Available | Positive | 2308983 - 2309070 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2309087 - 2309159 | Not Available |
| l-glyceraldehyde 3-phosphate reductase | DWW04_09450 | Not Available | Negative | 2309230 - 2310222 | 36877.1 |
| argininosuccinate lyase | DWW04_09455 | Not Available | Negative | 2310246 - 2311586 | 50507.2 |
| srpbcc family protein | DWW04_09460 | Not Available | Negative | 2311602 - 2312006 | 15213.7 |
| orotate phosphoribosyltransferase | DWW04_09465 | Not Available | Negative | 2312104 - 2312742 | 23402.3 |
| comf family protein | DWW04_09470 | Not Available | Negative | 2312842 - 2313537 | 26184.1 |
| recx family transcriptional regulator | DWW04_09475 | Not Available | Negative | 2313518 - 2314003 | 18844.6 |
| peptide chain release factor n(5)-glutamine methyltransferase | DWW04_09480 | Not Available | Negative | 2314005 - 2314841 | 31727.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

