Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DWW04_09380 | Not Available | Negative | 2285650 - 2286648 | 37749.0 |
| glycoside hydrolase family 127 protein | DWW04_09385 | Not Available | Negative | 2286653 - 2289076 | 90490.2 |
| glycosyl hydrolase | DWW04_09390 | Not Available | Negative | 2289096 - 2291489 | 91548.7 |
| beta-xylosidase | DWW04_09395 | Not Available | Negative | 2291516 - 2293060 | 57695.0 |
| hypothetical protein | DWW04_09400 | Not Available | Negative | 2293073 - 2295142 | 78430.6 |
| glycoside hydrolase family 2 | DWW04_09405 | Not Available | Negative | 2295268 - 2297895 | 100304.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_09410 | Not Available | Negative | 2297998 - 2299614 | 60161.9 |
| tonb-dependent receptor | DWW04_09415 | Not Available | Negative | 2299660 - 2302713 | 113334.0 |
| hybrid sensor histidine kinase/response regulator | DWW04_09420 | Not Available | Positive | 2302965 - 2306960 | 152119.0 |
| dna-3-methyladenine glycosylase i | DWW04_09425 | Not Available | Positive | 2307062 - 2307649 | 22554.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

