Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWW04_09315 | Not Available | Negative | 2266065 - 2266499 | 15696.2 |
| atp-dependent rna helicase | DWW04_09320 | Not Available | Positive | 2266738 - 2268612 | 70681.2 |
| s46 family peptidase | DWW04_09325 | Not Available | Negative | 2268903 - 2271029 | 80088.8 |
| tigr00341 family protein | DWW04_09330 | Not Available | Negative | 2271034 - 2272398 | 50777.6 |
| lipopolysaccharide biosynthesis protein | DWW04_09335 | Not Available | Negative | 2272401 - 2273846 | 54399.0 |
| holliday junction branch migration dna helicase ruvb | DWW04_09340 | Not Available | Negative | 2273850 - 2274878 | 38049.7 |
| site-specific integrase | DWW04_09345 | Not Available | Positive | 2275005 - 2276123 | 43254.0 |
| hypothetical protein | DWW04_09355 | Not Available | Positive | 2276529 - 2279129 | 91009.3 |
| hypothetical protein | DWW04_09370 | Not Available | Negative | 2282901 - 2283140 | 9308.07 |
| hypothetical protein | DWW04_09375 | Not Available | Negative | 2283221 - 2285647 | 92701.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

