Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate butyryltransferase | DWW04_09165 | Not Available | Negative | 2237834 - 2238742 | 33274.2 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DWW04_09170 | Not Available | Positive | 2238825 - 2240582 | 64996.2 |
| glutamine cyclotransferase | DWW04_09175 | Not Available | Positive | 2240658 - 2241662 | 37735.6 |
| sufe family protein | DWW04_09180 | Not Available | Positive | 2241674 - 2242102 | 16170.5 |
| tonb-dependent receptor | DWW04_09185 | Not Available | Negative | 2242137 - 2244209 | 79276.8 |
| sensor histidine kinase | DWW04_09190 | Not Available | Positive | 2244261 - 2245799 | 59330.3 |
| dna-binding response regulator | DWW04_09195 | Not Available | Positive | 2245804 - 2246487 | 26125.7 |
| sam-dependent methyltransferase | DWW04_09200 | Not Available | Negative | 2246484 - 2247668 | 43785.1 |
| d-alanyl-d-alanine dipeptidase | DWW04_09205 | Not Available | Negative | 2247672 - 2248337 | 25332.9 |
| marr family transcriptional regulator | DWW04_09210 | Not Available | Negative | 2248361 - 2248708 | 13218.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

