Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | DWW04_09115 | Not Available | Positive | 2224852 - 2226138 | 47985.9 |
| hypothetical protein | DWW04_09120 | Not Available | Positive | 2226161 - 2226544 | 15190.0 |
| asnc family transcriptional regulator | DWW04_09125 | Not Available | Positive | 2226661 - 2227119 | 17087.9 |
| duf4491 family protein | DWW04_09130 | Not Available | Positive | 2227126 - 2227440 | 12155.1 |
| hypothetical protein | DWW04_09135 | Not Available | Negative | 2227640 - 2229919 | 87483.5 |
| sensor histidine kinase | DWW04_09140 | Not Available | Positive | 2230110 - 2231471 | 52414.1 |
| dna-binding response regulator | DWW04_09145 | Not Available | Positive | 2231520 - 2232188 | 24731.0 |
| tonb-dependent receptor | DWW04_09150 | Not Available | Positive | 2232239 - 2234638 | 91795.9 |
| helicase | DWW04_09155 | Not Available | Positive | 2235369 - 2236619 | 48018.2 |
| butyrate kinase | DWW04_09160 | Not Available | Negative | 2236757 - 2237821 | 38642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

