Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | DWW04_08910 | Not Available | Positive | 2173221 - 2174996 | 65624.0 |
| l-fucose:h+ symporter permease | DWW04_08915 | Not Available | Positive | 2175108 - 2176421 | 48513.5 |
| ribonuclease hii | DWW04_08920 | Not Available | Negative | 2176564 - 2177169 | 22912.5 |
| tetratricopeptide repeat protein | DWW04_08925 | Not Available | Positive | 2177271 - 2178896 | 63043.8 |
| tonb-dependent receptor | DWW04_08930 | Not Available | Positive | 2179120 - 2182248 | 116564.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW04_08935 | Not Available | Positive | 2182269 - 2183786 | 57946.4 |
| duf340 domain-containing protein | DWW04_08940 | Not Available | Positive | 2183901 - 2184182 | 10217.2 |
| lysine exporter lyso family protein | DWW04_08945 | Not Available | Positive | 2184179 - 2184781 | 21649.9 |
| duf4981 domain-containing protein | DWW04_08950 | Not Available | Positive | 2184795 - 2187971 | 121525.0 |
| glycoside hydrolase | DWW04_08955 | Not Available | Positive | 2188092 - 2190026 | 72992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

