Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW04_07690 | Not Available | Negative | 1820793 - 1822511 | 64244.0 |
| tonb-dependent receptor | DWW04_07695 | Not Available | Negative | 1822524 - 1825772 | 120390.0 |
| hybrid sensor histidine kinase/response regulator | DWW04_07700 | Not Available | Positive | 1825870 - 1830342 | 171758.0 |
| glycoside hydrolase family 28 protein | DWW04_07705 | Not Available | Negative | 1830420 - 1831826 | 52455.7 |
| hypothetical protein | DWW04_07710 | Not Available | Positive | 1832027 - 1832233 | 7695.31 |
| histidine kinase | DWW04_07715 | Not Available | Positive | 1832209 - 1832703 | 19225.9 |
| hypothetical protein | DWW04_07720 | Not Available | Positive | 1832731 - 1832916 | 7518.19 |
| histidine kinase | DWW04_07725 | Not Available | Positive | 1832913 - 1833314 | 16134.6 |
| histidine kinase | DWW04_07730 | Not Available | Positive | 1833299 - 1833532 | 8356.16 |
| atp-binding protein | DWW04_07735 | Not Available | Positive | 1833553 - 1833957 | 15179.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

