Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei strain AF14-1AC AF14-1AC.Scaf107, whole genome
Gene Summary
Adenine Count
1646125 bp
Thymine Count
1607159 bp
Guanine Count
1155492 bp
Cytosine Count
1197211 bp
Genome Length
5606424 bp
Protein-coding Genes
4603 genes
Non-Coding Genes
112 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | DWW04_00220 | Not Available | Negative | 31808 - 32974 | 42940.6 |
| sdr family oxidoreductase | DWW04_00225 | Not Available | Negative | 33000 - 33752 | 26792.4 |
| hypothetical protein | DWW04_00230 | Not Available | Negative | 33749 - 34099 | 13921.5 |
| flavodoxin | DWW04_00235 | Not Available | Negative | 34104 - 34670 | 20875.9 |
| cupin domain-containing protein | DWW04_00240 | Not Available | Negative | 34672 - 35505 | 30304.9 |
| arac family transcriptional regulator | DWW04_00245 | Not Available | Negative | 35636 - 36448 | 31522.8 |
| sdr family oxidoreductase | DWW04_00250 | Not Available | Negative | 36595 - 37422 | 29445.9 |
| pyridoxal phosphate-dependent aminotransferase | DWW04_00255 | Not Available | Negative | 37475 - 38644 | 44558.3 |
| mate family efflux transporter | DWW04_00260 | Not Available | Negative | 38648 - 40081 | 51495.8 |
| duf3737 family protein | DWW04_00265 | Not Available | Negative | 40101 - 40967 | 33057.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

