Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Brucellaceae
Genus
Pseudochrobactrum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Brucellaceae |
| Genus | Pseudochrobactrum |
| Species | Pseudochrobactrum asaccharolyticum |
| Strain | DSM 25619 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil-contaminated water; Fresh water; Jones Creek oil field; root nodules of leguminous plants; soil; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1130965 bp
Thymine Count
1155614 bp
Guanine Count
1200445 bp
Cytosine Count
1161986 bp
Genome Length
4649592 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
188 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | DFR47_101508 | Not Available | Positive | 550416 - 551723 | 46921.2 |
| transcriptional repressor nrdr | DFR47_101509 | Not Available | Positive | 552043 - 552525 | 18202.6 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | DFR47_101510 | Not Available | Positive | 552746 - 553909 | 40972.2 |
| riboflavin synthase alpha chain | DFR47_101511 | Not Available | Positive | 553959 - 554567 | 22084.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | DFR47_101512 | Not Available | Positive | 554988 - 555449 | 16218.1 |
| nusb antitermination factor | DFR47_101513 | Not Available | Positive | 555451 - 555957 | 18811.5 |
| k(+)-stimulated pyrophosphate-energized sodium pump | DFR47_101514 | Not Available | Positive | 556405 - 558546 | 72577.2 |
| beta-barrel assembly machine subunit bame | DFR47_101515 | Not Available | Negative | 558614 - 559126 | 18526.4 |
| cytochrome b pre-mrna-processing protein 3 | DFR47_101516 | Not Available | Positive | 559216 - 559755 | 20597.8 |
| uncharacterized metal-binding protein yced (duf177 family) | DFR47_101517 | Not Available | Positive | 559814 - 560389 | 21148.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
